Assign tip values to a tree based on OTU information file.

Assign tip values to a tree based on OTU information file.

get_tip_values(treefile, otufile)

Arguments

treefile	A character vector with the path to the tree you want to plot in newick format.
otufile	A character vector with the path to the OTU information csv file generated by Physcraper

Value

a list of a phylo object and a vector of tip values

Author

Emily Jane McTavish

Examples

treefile = 'data/pg_2827_tree6577/run_pg_2827tree6577_run4/RAxML_bestTree.2020-07-31'
otufile = 'data/pg_2827_tree6577/outputs_pg_2827tree6577/otu_info_pg_2827tree6577.csv'